Package: wqspt 1.0.2
wqspt: Permutation Test for Weighted Quantile Sum Regression
Implements a permutation test method for the weighted quantile sum (WQS) regression, building off the 'gWQS' package (Renzetti et al. <https://CRAN.R-project.org/package=gWQS>). Weighted quantile sum regression is a statistical technique to evaluate the effect of complex exposure mixtures on an outcome (Carrico et al. 2015 <doi:10.1007/s13253-014-0180-3>). The model features a statistical power and Type I error (i.e., false positive) rate trade-off, as there is a machine learning step to determine the weights that optimize the linear model fit. This package provides an alternative method based on a permutation test that should reliably allow for both high power and low false positive rate when utilizing WQS regression (Day et al. 2022 <doi:10.1289/EHP10570>).
Authors:
wqspt_1.0.2.tar.gz
wqspt_1.0.2.zip(r-4.7-any)wqspt_1.0.2.zip(r-4.6-any)wqspt_1.0.2.zip(r-4.5-any)
wqspt_1.0.2.tgz(r-4.6-any)wqspt_1.0.2.tgz(r-4.5-any)
wqspt_1.0.2.tar.gz(r-4.7-any)wqspt_1.0.2.tar.gz(r-4.6-any)
wqspt_1.0.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
wqspt/json (API)
| # Install 'wqspt' in R: |
| install.packages('wqspt', repos = c('https://drewdstat.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/drewdstat/wqspt/issues
Last updated from:e2d43bb4eb. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 186 | ||
| source / vignettes | OK | 402 | ||
| linux-release | OK | 210 | ||
| macos-release | OK | 173 | ||
| macos-oldrel | OK | 297 | ||
| windows-devel | OK | 116 | ||
| windows-release | OK | 173 | ||
| windows-oldrel | OK | 148 | ||
| wasm-release | OK | 147 |
Exports:wqs_full_permwqs_ptwqs_simwqspt_plot
Dependencies:abindbackportsbase64encbookdownbootbroombslibcachemcarcarDataclicodetoolscolorspacecommonmarkcowplotcpp11data.tableDerivdigestdoBydplyrevaluateextraDistrfarverfastmapfontawesomeforecastFormulafracdifffsfuturefuture.applygenericsggplot2ggrepelglobalsgluegridExtragridSVGgtablegWQShighrhtmltoolshttpuvisobandjquerylibjsonlitekableExtraknitrlabelinglaterlatticelifecyclelistenvlme4lmtestmagrittrMASSMatrixMatrixModelsmemoisemgcvmimeminqamodelrmvtnormnlmenloptrnnetnumDerivotelparallellypbapplypbkrtestpillarpkgconfigplotROCplyrpromisespsclpurrrquantregR6rappdirsrbibutilsRColorBrewerRcppRcppArmadilloRcppEigenRdpackreformulasreshape2rlangrlistrmarkdownrstudioapiS7sassscalesshinysourcetoolsSparseMstringistringrsurvivalsvglitesystemfontstextshapingtibbletidyrtidyselecttimeDatetinytexurcautf8vctrsviridisviridisLitewithrxfunXMLxml2xtableyamlzoo
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Full wrapper WQS permutation test | wqs_full_perm |
| WQS permutation test | wqs_pt |
| WQS simulated dataset generator | wqs_sim |
| Plotting method for wqspt object | wqspt_plot |
